MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Streptococcus acidominimus
6_8CXCR23O2_S6
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 497
bases: 2,471,173 bps
CDS: 2,088
rRNA: 4
Repeat region:
tmRNA: 1
tRNA: 48
misc RNA:
Total features: 2,141
Total number of protein coding genes annotated/found:
2,088
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5051|JADGLR010000397.1
SEQF5051_01882
Genome Viewer
NA
AA
315/105
789-475
hypothetical protein
SEQF5051|JADGLR010000397.1
SEQF5051_01883
Genome Viewer
NA
AA
534/178
1383-850
hypothetical protein
SEQF5051|JADGLR010000397.1
SEQF5051_01884
Genome Viewer
NA
AA
777/259
2269-1493
Regulatory protein RecX
SEQF5051|JADGLR010000397.1
SEQF5051_01885
Genome Viewer
NA
AA
1356/452
2307-3662
23S rRNA (uracil-C(5))-methyltransferase RlmCD
SEQF5051|JADGLR010000397.1
SEQF5051_01886
Genome Viewer
NA
AA
783/261
4210-4992
hypothetical protein
SEQF5051|JADGLR010000397.1
SEQF5051_01887
Genome Viewer
NA
AA
732/244
5244-5975
HTH-type transcriptional repressor NagR
SEQF5051|JADGLR010000297.1
SEQF5051_01511
Genome Viewer
NA
AA
864/288
93-956
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
SEQF5051|JADGLR010000297.1
SEQF5051_01512
Genome Viewer
NA
AA
768/256
953-1720
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
SEQF5051|JADGLR010000297.1
SEQF5051_01513
Genome Viewer
NA
AA
1278/426
3429-2152
Serine--tRNA ligase
SEQF5051|JADGLR010000297.1
SEQF5051_01514
Genome Viewer
NA
AA
372/124
4011-3640
hypothetical protein
SEQF5051|JADGLR010000170.1
SEQF5051_01059
Genome Viewer
NA
AA
441/147
4914-5354
hypothetical protein
SEQF5051|JADGLR010000170.1
SEQF5051_01060
Genome Viewer
NA
AA
174/58
7783-7610
hypothetical protein
SEQF5051|JADGLR010000170.1
SEQF5051_01061
Genome Viewer
NA
AA
1581/527
9434-7854
hypothetical protein
SEQF5051|JADGLR010000029.1
SEQF5051_00136
Genome Viewer
NA
AA
873/291
105-977
Modification methylase DpnIIA
SEQF5051|JADGLR010000029.1
SEQF5051_00137
Genome Viewer
NA
AA
801/267
1003-1803
Modification methylase DpnIIB
SEQF5051|JADGLR010000029.1
SEQF5051_00138
Genome Viewer
NA
AA
609/203
1775-2383
hypothetical protein
SEQF5051|JADGLR010000029.1
SEQF5051_00139
Genome Viewer
NA
AA
909/303
2386-3294
Type-2 restriction enzyme MboI
SEQF5051|JADGLR010000029.1
SEQF5051_00140
Genome Viewer
NA
AA
618/206
4403-3786
hypothetical protein
SEQF5051|JADGLR010000029.1
SEQF5051_00141
Genome Viewer
NA
AA
2172/724
7229-5058
PTS system glucose-specific EIICBA component
SEQF5051|JADGLR010000029.1
SEQF5051_00142
Genome Viewer
NA
AA
789/263
8031-7243
Maltose 6'-phosphate phosphatase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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